Bold text is from page 17 in the Mark IV b manual:
V1A= Input Stage
V1B= Tone Recovery Stage (post tone controls)
So V1 affects all channels
V2A=Third Gain Stage (Rhythm Modes) and Fifth Lead Gain Stage
V2B= FX Return Stage
So V2 affects all channels and the FX loop which is alway in the circuit even if it's not used.
V3A= First Lead High Gain Stage
V3B= Reverb Return
So V3 affects Lead and reverb. However, the way reverb is wired it is always in the circuit, so the tube affects all channels even with the reverb off.
V4A= Second Lead High Gain Stage
V4B= Reverb Send
So V4's effect is similar to V3 except with slightly different jobs.
V5= Phase Inverter
This affects all channels.
So the moral of the story is that: all of the preamp tubes affect all of the channels in a sense. Keep in mind the preamp tubes are actually like 2 tubes in one bottle. You have an A side and a B side. That's why the manual lists them that way!!
Hope this clears things up for you. 8)