okay, this is a very quick unedited one time through comparison of the cleans as follows:
Signal Chain: Mesa Boogie Mark V:35 head > Two Notes Torpedo Reload > Wall of Sound plugin using 1x12 with C90 speaker in Logic
1st play through 2 parts: Clean Mode and 2nd play through 2 parts: Fat Mode, Telecaster (1994 with Seymour Duncan quarter pounders, toggle in the middle position)
Signal Chain: Mesa Boogie Royal Atlantic head > Two Notes Torpedo Reload > Wall of Sound plugin using 1x12 with C90 speaker in Logic
3rd play through, 2 parts is the clean channel on the Royal Atlantic
I set both amps tone controls the same, bass 11 o'clock, mid 11 o'clock, treble 1:30, gain at noon
It's fairly sloppy and I hope it provides a reasonable amount information to help. a/b in the same room with your guitar and ears is always the best.
Finally, I did not try for optimum eq, etc. just a really quick example for you. I did try to get the volume of each one close.https://soundcloud.com/scott_r/royalatl ... 5cleantest